1. Ensembl Genome Browser
2. Ensembl Genome Browser Download
3. Integrated Genome Browser Download
4. Genome Browser Download

Download and unzip the Mac App Archive, then double-click the IGV application to run it. You can move the app to the Applications folder, or anywhere else. Ensembl Bacteria. Ensembl Bacteria is a browser for bacterial and archaeal genomes. T hese are taken from the databases of the International Nucleotide Sequence Database Collaboration (the European Nucleotide Archive at the EBI, GenBank at the NCBI, and the DNA Database of Japan). Non-redundant genomes. The ENA houses over 90,000 prokaryotic genome assemblies, including multiple strains of.

• The Celera GenomeBrowser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.

  • File Name:celeragb-5.1.jar
  • Author:Russell Turner

  • License:Freeware (Free)
  • File Size:5.7 Mb

  • Runs on:Linux

• The Celera GenomeBrowser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.

  • File Name:celeragb-5.1.jar
  • Author:Russell Turner

  • License:Freeware (Free)
  • File Size:5.7 Mb

  • Runs on:Linux

• The HuRef GenomeBrowser is a Web resource for the navigation of an individual human genome, termed HuRef, published in PLoS Biology. The browser is a unified framework of annotation, assembly and synteny tools. It is online at. ..

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  • File Name:HuRef Genome Browser
  • Author:huref

  • License:Freeware (Free)
  • File Size:8.92 Mb

  • Runs on:N/A

• VBI GenomeBrowser - Allows viewing of Genomic Data that adheres to the GUSDB data storage VBI Genome Browser - Allows viewing of Genomic Data that adheres to the GUSDB data storage standard.

  • File Name:VBI Genome Browser
  • Author:vbigenomebrowse

  • License:Freeware (Free)
  • File Size:42 Kb

  • Runs on:N/A

• Geneva is a whole genome browser and data visualization tool.

  • File Name:Geneva Genome Browser
  • Author:Dmitri Bichko

  • License:Freeware (Free)
  • File Size:

  • Runs on:Windows

• GenomeView is a next-generation stand-alone genomebrowser and editor initiated in the BSB group at VIB and currently developed at Broad Institute. It provides interactive visualization of sequences, annotation, multiple alignments, syntenic. ..

  • File Name:genomeview-1602.zip
  • Author:Thomas Abeel

  • License:Freeware (Free)
  • File Size:2.8 Mb

  • Runs on:WinXP, Windows Vista, Windows 7, Windows 7 x64

• Artemis is a free genomebrowser and annotation tool that allows visualisation of sequence features, next generation data and the results of analyses within the context of the sequence, and also its six-frame translation. Artemis is written in. ..

  • File Name:Artemis
  • Author:Wellcome Trust SangerInstitute

  • License:Freeware (Free)
  • File Size:10 Mb

  • Runs on:Windows2000, Windows2003, WinXP, Windows Vista, Windows 7, Linux, Mac OS X, Java

• Javascript library based on the canvas tag for displaying Genomics data. It support Bar-Line graphs, 2D-3D scatter plots, Heatmaps, Venn diagrams, Networks, GenomeBrowser and much more. It also supports data transformations and. ..

  • File Name:canvasXpress
  • Author:canvasxpress

  • License:Freeware (Free)
  • File Size:4.01 Mb

  • Runs on:N/A

• GenomeRunner is a tool for automating genome exploration.It performs annotation and enrichment analyses of user-provided genomic features of interest against >1000 genomic features available from UCSC genomebrowser. Human and mouse organisms are. ..

  • File Name:GenomeRunner-v3.0-Setup.zip
  • Author:sourceforge

  • License:Freeware (Free)
  • File Size:3.79 Mb

  • Runs on:Windows

• GenoViz provides software applications and re-usable components for genomics data visualization and data sharing. One included project is IGB: the Integrated GenomeBrowser. Documentation is available from. ..

  • File Name:igb.zip
  • Author:genoviz

  • License:Freeware (Free)
  • File Size:22.95 Mb

  • Runs on:Windows; BSD; Mac; Linux

• iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genomebrowser such as the UCSC genomebrowser (http://genome.ucsc.edu/).iPiG takes PSMs. ..

  • File Name:ipig_r4.zip
  • Author:sourceforge

  • License:Freeware (Free)
  • File Size:1.48 Mb

  • Runs on:Windows; Mac; Linux

• OmicBrowse, developed with Flash and Java, is a highly evaluated genomebrowser integrating omics knowledge ranging from genomes to phenomes and is especially appropriate for positional-cloning. ..

  • File Name:OmicBrowse-1.4.2.tar.gz
  • Author:omicbrowse

  • License:Freeware (Free)
  • File Size:33.39 Mb

  • Runs on:N/A

Related:Ensembl Genome Browser - Ensemble Genome Browser - Archaeal Genome Browser - Daphnia Genome Project - Daphnia Genome Consortium

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• Resources
  • Chemicals & Bioassays
  • DNA & RNA
  • Data & Software
  • Domains & Structures
  • Genes & Expression
  • Genetics & Medicine
  • Genomes & Maps
  • Homology
  • Literature
  • Proteins
  • Sequence Analysis
  • Taxonomy
  • Training & Tutorials
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• How To

Ensembl Genome Browser

Subjects

Ensembl Genome Browser Download

User Data and Track Hubs

Supported File/Data types

• Uploaded tracks
• BED
• GFF3
• GTF
• GVF
• VCF
• HGVS
• WIG
• ASN.1 (text and binary)
• Remote tracks
• Remote BAM .bam.bai index file present at same location
• Remote VCF .tbi index file present at same location
• BigBed
• BigWig

Assembly Region Details

Features of Interest

History

Downloads

Download SRA data from the 1000 Genomes Browser using SRA toolkit

• Install and Configure the SRA toolkit.

Download genotype data

Selected chromosome:

Selected range:

Download SRA dataFormat:

Download genotype dataFormat:

Integrated Genome Browser Download

Genome Browser Download